Download

CellProfiler 4.0
 

Note 1: On Mac, after downloading, put CellProfiler in your Applications folder and ctrl-click (or right-click) and choose Open. Otherwise, you will receive a warning: “CellProfiler can’t be opened because it is from an unidentified developer”.

Note 2: Ignore the warning “Error loading pipeline file” - just click OK.

Note: On Windows, after downloading and launching CellProfiler, if you get the “Windows protected your PC” message, click “More info” to allow you to hit “Run anyway” to install.

Source code available on Github

Previous CellProfiler releases