Download CellProfiler free image analysis software
Download CellProfiler Analyst free machine learning image analysis software
CellProfiler is free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically. See our papers on analyzing cell images and non-cell images.

CellProfiler Analyst is free open-source software for exploring and analyzing large, high-dimensional image-derived data. It includes machine learning tools for identifying complex and subtle phenotypes. See our papers on data visualization and machine learning.

CellProfiler image arrow CellProfiler detects and analyses biological images free software

Brochure about CellProfiler and CellProfiler Analyst

Funding and support for the CellProfiler project has been provided by: