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| CellProfiler is free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically. See our papers on analyzing cell images and non-cell images. | CellProfiler Analyst is free open-source software for exploring and analyzing large, high-dimensional image-derived data. It includes machine learning tools for identifying complex and subtle phenotypes. See our papers on data visualization and machine learning. | |
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CellProfiler News
March 29, 2010 — CellProfiler 2.0 Released
Our image analysis software CellProfiler has been completely redesigned and written in Python, and is available for download. New features include a sparkling new graphical interface, a test mode for experimenting with module settings, improved algorithms and more.
Monday, December 7, 2009 — CellProfiler Analyst 2.0 Released
Our data exploration tool CellProfiler Analyst has been re-released and is available for download here. The software boasts our most current advances to our Classifier tool as well as tools for visualizing and plotting data from CellProfiler.
Old news...
Broad Bioimage Benchmark Collection (BBBC)
The Broad Bioimage Benchmark Collection (BBBC) is a collection of freely available microscopy image sets for developing and testing image analysis algorithms.
Funding and support for the CellProfiler project has been provided by:
