.ics files

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.ics files

Postby cgenes » Thu Nov 05, 2009 12:13 pm


has anyone written a plugin that will allow .ics files to be opened. I have images which also contain text file and save as a .ics file

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Re: .ics files

Postby David Logan » Thu Nov 05, 2009 6:31 pm

The currently released Matlab version of CellProfiler does not specifically support .ics (Image Cytometry Standard) files. I don't think we have ever tried them, so I can't be sure, but I assume by your question that it does not work. Would you report your CP error feedback?

However, our soon-to-be-released CP2.0 uses BioFormats as a standard, which does apparently support ICS files http://www.loci.wisc.edu/ome/formats.html. You could be brave and try it using our svn repository or wait for the compiled version, to be released within the next couple months.

David Logan
Computational Biologist/Image Assay Developer
Imaging Platform, Broad Institute of MIT and Harvard
Carpenter Lab
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