.ics files

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.ics files

Postby cgenes » Thu Nov 05, 2009 12:13 pm

Hi

has anyone written a plugin that will allow .ics files to be opened. I have images which also contain text file and save as a .ics file

cheers
cgenes
 
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Re: .ics files

Postby davidlogan » Thu Nov 05, 2009 6:31 pm

The currently released Matlab version of CellProfiler does not specifically support .ics (Image Cytometry Standard) files. I don't think we have ever tried them, so I can't be sure, but I assume by your question that it does not work. Would you report your CP error feedback?

However, our soon-to-be-released CP2.0 uses BioFormats as a standard, which does apparently support ICS files http://www.loci.wisc.edu/ome/formats.html. You could be brave and try it using our svn repository or wait for the compiled version, to be released within the next couple months.

Cheers,
Dave
David Logan
Computational Biologist/Image Assay Developer
Imaging Platform, Broad Institute of MIT and Harvard
Carpenter Lab
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